Pattern discovery - problems

1gpt00 3.30.30.10.4.2.1

1gps00 3.30.30.10.4.1.1

1b3cA0 3.30.30.10.3.8.1

1cn200 3.30.30.10.3.7.1

1snb00 3.30.30.10.3.6.1

1lqh00 3.30.30.10.3.5.1

1aho00 3.30.30.10.3.4.1

1nra00 3.30.30.10.3.3.1

1vna00 3.30.30.10.3.2.1

2sn300 3.30.30.10.3.1.1

1sxm00 3.30.30.10.2.1.1

1ica00 3.30.30.10.1.1.1

Learning time : 7 ms

Search time : 506 ms length(pattern)=2

sequence=[0:10,1:2]+12+[e(1),[0:2,2:10]+12,e(2)]+([1:12]+12)

fixed structures=[s]

hbonds=[1-h(a)-2]

chiralities=[]

Matched 69 domains, of which 12 from learning set of 12, and 57 false positives

[(2,6),(40,46)]

[(2,4),(45,48)]

[(3,4),(45,48)]

[(2,5),(43,51)]

[(3,6),(46,52)]

[(2,5),(43,51)]

[(2,4),(42,48)]

[(2,4),(46,49)]

[(3,4),(45,49)]

[(27,30),(33,36)]

[(29,30),(36,37)]